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ddRAD-seq variant calling in peach and the effect of removing PCR duplicates
Ksouri, Najla; Benítez, M; Aballay, Maximiliano Martín; Sanchez, Gerardo; Contreras-Moreira, Bruno; Gogorcena Aoiz, Yolanda (ISHS, 2022)Double digest RAD-seq (ddRAD-seq) is a flexible and cost-effective strategy that has emerged as one of the most popular genotyping approaches in plants. It relies on combining two restriction enzymes for library preparation ... -
The genomic analysis of a wide peach germplasm collection revealed genetic relationships between European landraces and American ferals and landraces
Aballay, Maximiliano Martín; Ksouri, Najla; Valentini, Gabriel Hugo; Puebla, Andrea Fabiana; Gogorcena Aoiz, Yolanda; Sanchez, Gerardo (ISHS, 2022-12)The advance of next generation sequencing (NGS) technologies allows the implementation of high-throughput genotyping at a reasonable cost. This open the possibility to learn more about phylogenetic relationships, genetic ...