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Mostrando ítems 1-5 de 5

    • ATGC transcriptomics : a web-based application to integrate, explore and analyze de novo transcriptomic data 

      Gonzalez, Sergio Alberto; Clavijo, Bernardo; Rivarola, Maximo Lisandro; Moreno, Patricio; Fernández, Paula; Dopazo, Joaquín; Paniego, Norma Beatriz (2017-02-22)
      Background: In the last years, applications based on massively parallelized RNA sequencing (RNA-seq) have become valuable approaches for studying non-model species, e.g., without a fully sequenced genome. RNA-seq is a ...

    • Development, characterization and experimental validation of a cultivated sunflower (Helianthus annuus L.) gene expression oligonucleotide microarray 

      Fernandez, Paula Del Carmen; Soria, Marcelo Abel; Blesa, David; Di Rienzo, Julio A.; Moschen, Sebastian Nicolas; Rivarola, Maximo Lisandro; Clavijo, Bernardo; Gonzalez, Sergio; Peluffo, Lucila; Principi, Dario; Dosio, Guillermo; Aguirrezabal, Luis; García-García, Francisco; Conesa, Ana; Hopp, Horacio Esteban; Dopazo, Joaquín; Heinz, Ruth Amelia; Paniego, Norma Beatriz (PLOS One, 2012-10)
      Oligonucleotide-based microarrays with accurate gene coverage represent a key strategy for transcriptional studies in orphan species such as sunflower, H. annuus L., which lacks full genome sequences. The goal of this study ...

    • Integrating transcriptomic and metabolomic analysis to understand natural leaf senescence in sunflower 

      Moschen, Sebastian; Gonzalez, Sergio Alberto; Rivarola, Maximo Lisandro; Hopp, Horacio Esteban; Paniego, Norma Beatriz; Fernandez, Paula del Carmen; Heinz, Ruth Amelia; Bengoa Luoni, Sofia Ailin; Di Rienzo, Julio A.; Caro, María del Pilar; Tohge, Takayuki; Watanabe, Mutsumi; Hollmann, Julien; García-García, Francisco; Dopazo, Joaquín; Hoefgen, Rainer; Fernie, Alisdair R. (2016)
      Leaf senescence is a complex process, which has dramatic consequences on crop yield. In sunflower, gap between potential and actual yields reveals the economic impact of senescence. Indeed, sunflower plants are incapable ...

    • Integration of transcriptomic and metabolic data reveals hub transcription factors involved in drought stress response in sunflower (Helianthus annuus L.) 

      Moschen, Sebastian Nicolas; Di Rienzo, Julio A.; Higgins, Janet; Tohge, Takayuki; Watanabe, Mutsumi; Gonzalez, Sergio Alberto; Rivarola, Maximo Lisandro; García-García, Francisco; Dopazo, Joaquín; Hopp, Horacio Esteban; Hoefgen, Rainer; Fernie, Alisdair R.; Paniego, Norma Beatriz; Fernandez, Paula Del Carmen; Heinz, Ruth Amelia (2017-07)
      Drought is one of the most important environmental stresses that effects crop productivity in many agricultural regions. Sunflower is tolerant to drought conditions but the mechanisms involved in this tolerance remain ...

    • Plastome genomics in South American maize landraces: chloroplast lineages parallel the geographic structuring of nuclear gene pools 

      Lopez, Mariana Gabriela; Fass, Monica Irina; Rivas, Juan Gabriel; Carbonell-Caballero, José; Vera, Pablo Alfredo; Puebla, Andrea Fabiana; Defacio, Raquel Alicia; Dopazo, Joaquín; Paniego, Norma Beatriz; Hopp, Horacio Esteban; Lia, Verónica Viviana (Oxford University Press, 2021-03)
      Background and Aims: The number of plastome sequences has increased exponentially during the last decade. However, there is still little knowledge of the levels and distribution of intraspecific variation. The aims of this ...