• Expression-based analysis of genes related to single nucleotide polymorphism hits associated with bovine leukemia virus proviral load in Argentinean dairy cattle 

      Petersen, Marcos Iván; Carignano, Hugo Adrian; Suarez Archilla, Guillermo; Caffaro, María Eugenia; Alvarez, Irene; Miretti, Marcos Mateo; Trono, Karina Gabriela (Elsevier, 2021-02)
      In dairy cattle infected with bovine leukemia virus (BLV), the proviral load (PVL) level is directly related to the viral transmission from infected animals to their healthy herdmates. Two contrasting phenotypic groups can ...
    • Machine learning algorithms identified relevant SNPs for milk fat content in cattle 

      Ríos, Pablo J.; Raschia, Maria Agustina; Maizon, Daniel Omar; Demitrio, Daniel Arturo; Poli, Mario Andres (Sociedad Argentina de Informática, 2021-10)
      In recent years, machine learning methods have been shown to be efficient in identifying a subset of single nucleotide polymorphisms (SNP) underlying a trait of interest. The aim of this study was the construction of ...
    • Optimizing ddRADseq in non-model species: a case study in Eucalyptus dunnii maiden 

      Aguirre, Natalia Cristina; Filippi, Carla Valeria; Zaina, Giusi; Rivas, Juan Gabriel; Acuña, Cintia Vanesa; Villalba, Pamela Victoria; Garcia, Martin Nahuel; Gonzalez, Sergio; Rivarola, Maximo Lisandro; Martinez, Maria Carolina; Puebla, Andrea Fabiana; Morgante, Michele; Hopp, Horacio Esteban; Paniego, Norma Beatriz; Marcucci Poltri, Susana Noemi (MDPI, 2019-08)
      Restriction site-associated DNA sequencing (RADseq) and its derived protocols, such as double digest RADseq (ddRADseq), offer a flexible and highly cost-effective strategy for efficient plant genome sampling. This has ...
    • Preliminary genome-wide association study for skin traits in an Angora x creole backcross population 

      Cano Pereira, Ema Margarita; Debenedetti, Sebastián; Giovannini, Nicolas; Taddeo, Héctor Raúl; Poli, Mario Andres (Masey University (Nueva Zelanda), 2018-02)
      Angora goat produce mainly mohair fiber but the Creole goats have a double hair coat: cashmere, fine and short seasonal down coat and coarser and longer guard hair. Both, mohair and cashmere fiber are determined by two ...
    • Relevant loci for milk production in dairy cattle, obtained by machine learning algorithms 

      Raschia, Maria Agustina; Ríos, Pablo J.; Maizon, Daniel Omar; Demitrio, Daniel Arturo; Poli, Mario Andres (Network of Women in Bioinformatics and Data Science, 2021-09)
      Background: Extensive genetic research focused on identifyng associations between single nucleotide polymorphism (SNP) markers located all over the genome and milk traits were conducted for different dairy cattle breeds. ...
    • Single nucleotide polymorphisms from candidate genes associated with nematode resistance and resilience in Corriedale and Pampinta sheep in Argentina 

      Raschia, Maria Agustina; Donzelli, María Valeria; Medus, Pablo Daniel; Cetra, Bibiana Maria; Maizon, Daniel Omar; Suarez, Victor Humberto; Pichler, Rudolf; Periasamy, Kathiravan; Poli, Mario Andres (Elsevier, 2021-02)
      Selective breeding of genetically resistant animals is considered a promising strategy to face the problem of nematode resistance to anthelmintics and mitigate concerns about the presence of chemical residues in animal ...
    • SNP genotyping by heteroduplex analysis 

      Paniego, Norma Beatriz; Fusari, Corina Mariana; Lia, Veronica Viviana; Puebla, Andrea Fabiana (Springer, 2015-10)
      Heteroduplex-based genotyping methods have proven to be technologically effective and economically efficient for low- to medium-range throughput single-nucleotide polymorphism (SNP) determination. In this chapter we describe ...