• Genome-based reclassification of Azospirillum brasilense Az39 as the type strain of Azospirillum argentinense sp. nov. 

      dos Santos Ferreira, Natália; Coniglio, Nayla Anahí; Puente, Mariana Laura; Sant’Anna, Fernando Hayashi; Maroniche, Guillermo Andrés; Garcia, Julia Elena; Molina, Romina Micaela; Nievas, Sofía; Volpiano, Camila Gazolla; Ambrosini, Adriana; Passaglia, Luciane Maria Pereira; Pedraza, Raúl Osvaldo; Reis, Veronica Massena; Zilli, Jerri Edson; Cassan, Fabricio Dario (Microbiology Society, 2022-08-01)
      Strain Az39T of Azospirillum is a diazotrophic plant growth-promoting bacterium isolated in 1982 from the roots of wheat plants growing in Marcos Juárez, Córdoba, Argentina. It produces indole-3- acetic acid in the presence ...
    • Genome-wide association studies in sunflower : towards sclerotinia sclerotiorum and diaporthe/phomopsis resistance breeding 

      Filippi, Carla Valeria; Corro Molas, Andres Ezequiel; Dominguez, Matías; Colombo, Denis Nahuel; Heinz, Nicolás; Troglia, Carolina Beatriz; Maringolo, Carla Andrea; Quiroz, Facundo Jose; Alvarez, Daniel; Lia, Veronica Viviana; Paniego, Norma Beatriz (MDPI, 2022-12)
      Diseases caused by necrotrophic fungi, such as the cosmopolitan Sclerotinia sclerotiorum and the Diaporthe/Phomopsis complex, are among the most destructive diseases of sunflower worldwide. The lack of complete resistance ...
    • Genome-wide data (ChIP-seq) enabled identification of cell wall-related and aquaporin genes as targets of tomato ASR1, a drought stress-responsive transcription factor 

      Ricardi, Martiniano María; González, Rodrigo Matías; Silin, Zhong; Dominguez, Pia Guadalupe; Duffy, Tomas; Turjanski, Pablo Guillermo; Salgado Salter, Juan David; Alleva, Karina Edith; Carrari, Fernando; Giovannoni, James J.; Estevez, Jose Manuel; Iusem, Norberto Daniel (BMC, 2014-01)
      Background: Identifying the target genes of transcription factors is important for unraveling regulatory networks in all types of organisms. Our interest was precisely to uncover the spectrum of loci regulated by a widespread ...
    • Genome-wide scan for commons SNPs affecting bovine leukemia virus infection level in dairy cattle 

      Carignano, Hugo Adrian; Roldan, Dana Leticia; Beribe, Maria Jose; Raschia, Maria Agustina; Amadio, Ariel; Nani, Juan Pablo; Gutierrez, Gerónimo; Alvarez, Irene; Trono, Karina Gabriela; Poli, Mario Andres; Miretti, Marcos Mateo (2018-02-13)
      Background: Bovine leukemia virus (BLV) infection is omnipresent in dairy herds causing direct economic losses due to trade restrictions and lymphosarcoma-related deaths. Milk production drops and increase in the culling ...
    • Genomic analysis of an Argentinean isolate of Spodoptera frugiperda granulovirus reveals that various baculoviruses code for Lef-7 proteins with three F-box domains 

      Ferrelli, Maria Leticia; Pidre, Matias Luis; Ghiringhelli, Pablo Daniel; Torres, Sofía; Fabre, María Laura; Masson, Tomás; Cédola, Maia Tatiana; Sciocco, Alicia Ines; Romanowski, Victor (2018)
      A new isolate of the Spodoptera frugiperda granulovirus, SfGV ARG, was completely sequenced and analyzed. The SfGV ARG genome is 139,812 bp long and encodes 151 putative open reading frames. Of these ORFs, 56 were found ...
    • K-mer counting and curated libraries drive efficient annotation of repeats in plant genomes 

      Contreras-Moreira, Bruno; Filippi, Carla Valeria; Naamati, Guy; García Girón, Carlos; Allen, James E.; Flicek, Paul (Wiley, 2021-09)
      The annotation of repetitive sequences within plant genomes can help in the interpretation of observed phenotypes. Moreover, repeat masking is required for tasks such as whole-genome alignment, promoter analysis, or pangenome ...
    • Manual sobre diagnóstico molecular de leptospirosis 

      Grune Loffler, Sylvia (INTA Ediciones, 2022)
      Este manual es una recopilación sobre las herramientas moleculares de diagnóstico y caracterización de cepas aisladas. Este trabajo es resultado de la integración de más de 10 años de trabajo durante mi tesis doctoral y ...
    • Microevolution rather than large genome divergence determines the effectiveness of legume–rhizobia symbiotic interaction under field conditions 

      Jozefkowicz, Cintia; Brambilla, Silvina Maricel; Frare, Romina Alejandra; Stritzler, Margarita; Puente, Mariana Laura; Piccinetti, Carlos Fabian; Soto, Gabriela Cinthia; Ayub, Nicolás Daniel (2017-08)
      Despite the vast screening for natural nitrogenfixing isolates by public and private consortia, no significant progresses in the production of improved nitrogenfixing inoculants for alfalfa production have been made in the ...
    • Pre-columbian mycobacterial genomes reveal seals as a source of new world human tuberculosis 

      Bos, Kirsten I.; Harkins, Kelly M.; Herbig, Alexander; Coscolla, Mireia; Weber, Nico; Comas, Iñaki; Forrest, Stephen A.; Bryant, Josephine M.; Harris, Simon R.; Schuenemann, Verena J.; Campbell, Tessa J.; Majander, Kerrtu; Wilbur, Alicia K.; Guichon, Ricardo A.; Steadman, Dawnie L. Wolfe; Cook, Della Collins; Niemann, Stefan; Behr, Marcel A.; Zumarraga, Martin Jose; Bastida, Ricardo; Huson, Daniel; Nieselt, Kay; Young, Douglas; Parkhill, Julian; Buikstra, Jane E.; Gagneux, Sebastien; Stone, Anne C.; Krause, Johannes (Springer Nature, 2014-08)
      Modern strains of Mycobacterium tuberculosis from the Americas are closely related to those from Europe, supporting the assumption that human tuberculosis was introduced post-contact1. This notion, however, is incompatible ...
    • Preliminary genome-wide association study for skin traits in an Angora x creole backcross population 

      Cano Pereira, Ema Margarita; Debenedetti, Sebastián; Giovannini, Nicolas; Taddeo, Héctor Raúl; Poli, Mario Andres (Masey University (Nueva Zelanda), 2018-02)
      Angora goat produce mainly mohair fiber but the Creole goats have a double hair coat: cashmere, fine and short seasonal down coat and coarser and longer guard hair. Both, mohair and cashmere fiber are determined by two ...
    • Preparation of a working seed lot of BCG and quality control by PCR genotyping 

      Trovero, A.; Argüelles, Claudia; Cataldi, Angel Adrian (Asociación Argentina de Microbiología, 2010-04)
      The bacillus Calmette-Guérin (BCG) was obtained in 1920 after successive passages leading to the attenuation of a Mycobacterium bovis strain. For the following 40 years, BCG had been replicated, resulting in substrains ...
    • The genome of the stress-tolerant wild tomato species Solanum pennellii 

      Bolger, Anthony; Scossa, Federico; Bolger, Marie E.; Lanz, Christa; Maumus, Florian; Tohge, Takayuki; Quesneville, Hadi; Alseekh, Saleh; Sørensen, Iben; Lichtenstein, Gabriel; Fich, Eric A.; Conte, Mariana; Keller, Heike; Schneeberger, Korbinian; Schwacke, Rainer; Ofner, Itai; Vrebalov, Julia; Xu, Yimin; Osorio, Sonia; Aflitos, Saulo Alves; Schijlen, Elio; Jiménez-Goméz, José M.; Ryngajllo, Malgorzata; Kimura, Seisuke; Kumar, Ravi; Koenig, Daniel; Headland, Lauren R.; Maloof, Julin N.; Sinha, Neelima; van Ham, Roeland C. H. J.; Lankhorst, René Klein; Mao, Linyong; Vogel, Alexander; Arsova, Borjana; Panstruga, Ralph; Fei, Zhangjun; Rose, Jocelyn K. C.; Zamir, Dani; Carrari, Fernando; Giovannoni, James J.; Weigel, Detlef; Usadel, Björn; Fernie, Alisdair R. (Nature Publishing Group, 2014-09)
      Solanum pennellii is a wild tomato species endemic to Andean regions in South America, where it has evolved to thrive in arid habitats. Because of its extreme stress tolerance and unusual morphology, it is an important ...
    • Weighted single-step genome-wide association analyses for milk traits in Holstein and Holstein x Jersey crossbred dairy cattle 

      Raschia, Maria Agustina; Nani, Juan Pablo; Carignano, Hugo Adrian; Amadio, Ariel; Maizon, Daniel Omar; Poli, Mario Andres (Elsevier, 2020-12)
      The purpose of this study was to identify genomic regions explaining a major proportion of the genetic variance in milk production and milk fat and protein content on a commercial herd of Holstein and Holstein x Jersey ...
    • Whole-genome analysis of natural interspecific recombinant between bovine alphaherpesviruses 1 and 5 

      Romera, Sonia Alejandra; Perez, Ruben; Marandino, Ana; Tau, Rocio Lucia; Campos, Fabricio; Roehe, Paulo Michel; Thiry, Etienne; Maidana, Silvina Soledad (Elsevier, 2022-02)
      Bovine alphaherpesviruses 1 and 5 (BoHV-1 and BoHV-5) are closely related viruses that co-circulate in South America and recombine in the field. The complete genomes of three natural gB gene recombinant viruses between ...
    • Whole-Genome Resequencing of Spontaneous Oxidative Stress-Resistant Mutants Reveals an Antioxidant System of Bradyrhizobium japonicum Involved in Soybean Colonization 

      Liebrenz, Karen Ivana; Gomez, Maria Cristina; Brambilla, Silvina Maricel; Frare, Romina Alejandra; Stritzler, Margarita; Maguire, Vanina; Ruiz, Oscar; Soldini, Diego Omar; Pascuan, Cecilia Gabriela; Soto, Gabriela Cynthia; Ayub, Nicolás Daniel (Springer, 2021-11)
      Soybean is the most inoculant-consuming crop in the world, carrying strains belonging to the extremely related species Bradyrhizobium japonicum and Bradyrhizobium diazoefficiens. Currently, it is well known that B. japonicum ...