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Abstract
Because so few viruses in the family Barnaviridae have been reported, we searched for more of them in public sequence databases. Here, we report the complete coding sequence of Colobanthus quitensis associated barnavirus 1, mined from a transcriptome of the Antarctic pearlwort Colobanthus quitensis. The 4.2-kb plus-strand sequence of this virus encompasses four main open reading frames (ORFs), as expected for barnaviruses, including ORFs for a [ver mas...]
dc.contributor.authorNibert, Max L.
dc.contributor.authorManny, Austin R.
dc.contributor.authorDebat, Humberto Julio
dc.contributor.authorFirth, Andrew E.
dc.contributor.authorBertini, Laura
dc.contributor.authorCaruso, Carla
dc.date.accessioned2018-04-23T14:22:51Z
dc.date.available2018-04-23T14:22:51Z
dc.date.issued2018-03
dc.identifier.issn0304-8608 (Print)
dc.identifier.issn1432-8798 (Online)
dc.identifier.otherhttps://doi.org/10.1007/s00705-018-3794-x
dc.identifier.urihttp://hdl.handle.net/20.500.12123/2284
dc.identifier.urihttps://link.springer.com/article/10.1007%2Fs00705-018-3794-x
dc.description.abstractBecause so few viruses in the family Barnaviridae have been reported, we searched for more of them in public sequence databases. Here, we report the complete coding sequence of Colobanthus quitensis associated barnavirus 1, mined from a transcriptome of the Antarctic pearlwort Colobanthus quitensis. The 4.2-kb plus-strand sequence of this virus encompasses four main open reading frames (ORFs), as expected for barnaviruses, including ORFs for a protease-containing polyprotein, an RNA-dependent RNA polymerase whose translation appears to rely on − 1 ribosomal frameshifting, and a capsid protein that is likely to be translated from a subgenomic RNA. The possible derivation of this virus from a fungus associated with C. quitensis is discussed.eng
dc.formatapplication/pdfes_AR
dc.language.isoenges_AR
dc.rightsinfo:eu-repo/semantics/openAccesses_AR
dc.sourceArchives of virology 163 (7) : 1921–1926. (July 2018)es_AR
dc.subjectGenéticaes_AR
dc.subjectGeneticseng
dc.subjectSecuencia Nucleotídicaes_AR
dc.subjectNucleotide Sequenceeng
dc.subjectVirus de las Plantases_AR
dc.subjectPlant Viruseseng
dc.subject.otherBarnaviruses_AR
dc.subject.otherColobanthus quitensises_AR
dc.subject.otherSecuencia Genéticaes_AR
dc.titleA barnavirus sequence mined from a transcriptome of the Antarctic pearlwort Colobanthus quitensises_AR
dc.typeinfo:ar-repo/semantics/artículoes_AR
dc.typeinfo:eu-repo/semantics/articlees_AR
dc.typeinfo:eu-repo/semantics/publishedVersiones_AR
dc.description.origenInstituto de Patología Vegetales_AR
dc.description.filFil: Nibert, Max L. Harvard Medical School. Department of Microbiology and Immunobiology; Estados Unidos. Harvard University. Ph.D. Program in Virology; Estados Unidoses_AR
dc.description.filFil: Manny, Austin R. Harvard University. Ph.D. Program in Virology; Estados Unidoses_AR
dc.description.filFil: Debat, Humberto Julio. Instituto Nacional de Tecnología Agropecuaria (INTA). Instituto de Patología Vegetal; Argentinaes_AR
dc.description.filFil: Firth, Andrew E. University of Cambridge. Division of Virology. Department of Pathology; Gran Bretañaes_AR
dc.description.filFil: Bertini, Laura. Universita degli Studi della Tuscia. Department of Ecological and Biological Sciences; Italiaes_AR
dc.description.filFil: Caruso, Carla. Universita degli Studi della Tuscia. Department of Ecological and Biological Sciences; Italiaes_AR
dc.subtypecientifico


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