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This contribution contains data associated to the research article entitled “Exploring the genes of yerba mate (Ilex paraguariensis A. St.-Hil.) by NGS and de novo transcriptome assembly” (Debat et al., 2014) [1]. By means of a bioinformatic approach involving extensive NGS data analyses, we provide a resource encompassing the full transcriptome assembly of yerba mate, the first available reference for the Ilex L. genus. This dataset (Supplementary files [ver mas...]
dc.contributor.authorAguilera, Patricia Mabel
dc.contributor.authorDebat, Humberto Julio
dc.contributor.authorGrabiele, Mauro
dc.date.accessioned2018-04-16T11:59:47Z
dc.date.available2018-04-16T11:59:47Z
dc.date.issued2018-04
dc.identifier.issn2352-3409
dc.identifier.otherhttps://doi.org/10.1016/j.dib.2018.02.015
dc.identifier.urihttps://www.sciencedirect.com/science/article/pii/S2352340918301318
dc.identifier.urihttp://hdl.handle.net/20.500.12123/2249
dc.description.abstractThis contribution contains data associated to the research article entitled “Exploring the genes of yerba mate (Ilex paraguariensis A. St.-Hil.) by NGS and de novo transcriptome assembly” (Debat et al., 2014) [1]. By means of a bioinformatic approach involving extensive NGS data analyses, we provide a resource encompassing the full transcriptome assembly of yerba mate, the first available reference for the Ilex L. genus. This dataset (Supplementary files 1 and 2) consolidates the transcriptome-wide assembled sequences of I. paraguariensis with further comprehensive annotation of the protein coding genes of yerba mate via the integration of Arabidopsis thaliana databases. The generated data is pivotal for the characterization of agronomical relevant genes in the tree crop yerba mate -a non-model species- and related taxa in Ilex. The raw sequencing data dissected here is available at DDBJ/ENA/GenBank (NCBI Resource Coordinators, 2016) [2] Sequence Read Archive (SRA) under the accession SRP043293 and the assembled sequences have been deposited at the Transcriptome Shotgun Assembly Sequence Database (TSA) under the accession GFHV00000000.eng
dc.formatapplication/pdfes_AR
dc.language.isoenges_AR
dc.rightsinfo:eu-repo/semantics/openAccesses_AR
dc.sourceData in Brief 17 : 1036-1040 (April 2018)es_AR
dc.subjectMatees_AR
dc.subjectGenéticaes_AR
dc.subjectGeneticseng
dc.subjectIlex paraguariensises_AR
dc.subjectGeneses_AR
dc.subjectSecuencia Nucleotídicaes_AR
dc.subjectNucleotide Sequenceeng
dc.subject.otherYerba Matees_AR
dc.subject.otherSecuencia Genéticaes_AR
dc.titleDataset of the first transcriptome assembly of the tree crop “yerba mate” (Ilex paraguariensis) and systematic characterization of protein coding geneses_AR
dc.typeinfo:ar-repo/semantics/artículoes_AR
dc.typeinfo:eu-repo/semantics/articlees_AR
dc.typeinfo:eu-repo/semantics/publishedVersiones_AR
dc.description.origenInstituto de Patología Vegetales_AR
dc.description.filFil: Aguilera, Patricia Mabel. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Nordeste. Instituto de Biología Subtropical. Universidad Nacional de Misiones. Instituto de Biología Subtropical; Argentinaes_AR
dc.description.filFil: Debat, Humberto Julio. Instituto Nacional de Tecnología Agropecuaria (INTA). Instituto de Patología Vegetal; Argentinaes_AR
dc.description.filFil: Grabiele, Mauro. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Nordeste. Instituto de Biología Subtropical. Universidad Nacional de Misiones. Instituto de Biología Subtropical; Argentinaes_AR
dc.subtypecientifico


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