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A beginner’s guide for FMDV quasispecies analysis: sub-consensus variant detection and haplotype reconstruction using next-generation sequencing
(Oxford Academic Press, 2020-09)Deep sequencing of viral genomes is a powerful tool to study RNA virus complexity. However, the analysis of next-generation sequencing data might be challenging for researchers who have never approached the study of viral ... -
Embryogenesis and apoptosis appears as key molecular pathways involved in Varroa destructor reproduction
(Springer, 2023-10)In this study, we identified candidate genes associated with the reproductive success of Varroa destructor in Apis mellifera brood cells at a key point in time, the 4th day after host cell capping. First-life cycle reproducing ... -
Exploring sunflower responses to Sclerotinia head rot at early stages of infection using RNA‑seq analysis
(Springer Nature, 2020-08)Sclerotinia head rot (SHR), caused by the necrotrophic fungus Sclerotinia sclerotiorum, is one of the most devastating sunflower crop diseases. Despite its worldwide occurrence, the genetic determinants of plant resistance ... -
Identification of candidate genes associated with host-seeking behavior in the parasitoid wasp Diachasmimorpha longicaudata
(BioMed Central, 2024-02)Background: Diachasmimorpha longicaudata is a hymenopteran fruit fly endoparasitoid. Females of this species find their hosts for oviposition by using complex sensorial mechanisms in response to physical and chemical stimuli ... -
Transcriptome analysis of Anastrepha fraterculus sp. 1 males, females, and embryos: insights into development, courtship, and reproduction
(BioMed Central, 2020-12)Anastrepha fraterculus sp. 1 is considered a quarantine pest in several American countries. Since chemical control applied in an integrated pest management program is the only strategy utilized against this pest, the ...