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Breeding value predictive accuracy for scarcely recorded traits in a Eucalyptus grandis breeding population using genomic selection and data on predictor traits
Jurcic, Esteban Javier; Villalba, Pamela Victoria; Dutour, Joaquín; Centurión, Carmelo; Munilla, Sebastián; Cappa, Eduardo Pablo (Springer, 2023-07-18)Genomic selection methods are particularly useful for traits that are difcult or expensive to measure. We investigated the impact of using predictor growth traits and/or genomic information to increase the breeding value ... -
Characterization of genetic diversity in accessions of prunus salicina lindl : keeping fruit flesh color ideotype while adapting to water stressed environments
Acuña, Cintia Vanesa; Rivas, Juan Gabriel; Brambilla, Silvina Maricel; Cerrillo, Teresa; Frusso, Enrique; Garcia, Martin Nahuel; Villalba, Pamela Victoria; Aguirre, Natalia Cristina; Sabio Y Garcia, Julia Veronica; Martinez, Maria Carolina; Hopp, Horacio Esteban; Marcucci Poltri, Susana Noemi (MDPI, 2019-08)The genetic diversity of 14 Japanese plum (Prunus salicina Lindl) landraces adapted to an ecosystem of alternating flooding and dry conditions was characterized using neutral simple sequence repeat (SSR) markers. Twelve ... -
Comparison of ddRADseq and EUChip60K SNP genotyping systems for population genetics and genomic selection in Eucalyptus dunnii (Maiden)
Aguirre, Natalia Cristina; Villalba, Pamela Victoria; Garcia, Martin Nahuel; Filippi, Carla Valeria; Rivas, Juan Gabriel; Martinez, Maria Carolina; Acuña, Cintia Vanesa; Lopez, Javier Augusto; Lopez, Juan Adolfo; Pathauer, Pablo Santiago; Palazzini, Dino; Harrand, Leonel; Oberschelp, Gustavo Pedro Javier; Marco, Martin Alberto; Cisneros, Esteban F.; Carreras, Rocío; Alves, Ana; Rodrigues, Jose; Hopp, Horacio Esteban; Grattapaglia, Dario; Cappa, Eduardo Pablo; Paniego, Norma Beatriz; Marcucci Poltri, Susana Noemi (Frontiers Media, 2024-03)Eucalyptus dunnii is one of the most important Eucalyptus species for short-fiber pulp production in regions where other species of the genus are affected by poor soil and climatic conditions. In this context, E. dunnii ... -
Estudio de diversidad y estructura genética de procedencias locales de Eucalyptus sideroxylon (A.Cunn.ex Woolls) del norte de la provincia de Buenos Aires (Argentina)
Rivas, Juan Gabriel; Pathauer, Pablo Santiago; Aguirre, Natalia Cristina; Villalba, Pamela Victoria; Garcia, Martin Nahuel; Palazzini, Dino; Cappa, Eduardo Pablo; Acuña, Cintia Vanesa; Hopp, Horacio Esteban; Martinez, Maria Carolina; Marcucci Poltri, Susana Noemi (Red Argentina de Ciencia y Tecnología Forestal, 2023-03)Introducción: Eucalyptus sideroxylon (A.Cunn. ex Woolls) posee una amplia distribución natural, tolera bien las heladas, sequias y suelos pobres, pudiendo crecer en ambientes con 400 mm de precipitación anual (Boland et ... -
Genomic-based multiple-trait evaluation in Eucalyptus grandis using dominant DArT markers
Cappa, Eduardo Pablo; El-Kassaby, Yousry A.; Muñoz, Facundo; Garcia, Martin Nahuel; Villalba, Pamela Victoria; Klapste, Jaroslav; Marcucci Poltri, Susana Noemi (2018-06)We investigated the impact of combining the pedigree- and genomic-based relationship matrices in a multiple-trait individual-tree mixed model (a.k.a., multiple-trait combined approach) on the estimates of heritability and ... -
Improving accuracy of breeding values by incorporating genomic information in spatial - competition mixed models
Cappa, Eduardo Pablo; El-Kassaby, Yousry A.; Muñoz, Facundo; Garcia, Martin Nahuel; Villalba, Pamela Victoria; Klapste, Jaroslav; Marcucci Poltri, Susana Noemi (2017-10)Climate change and the increasing demand for sustainable energy resources require urgent strategies to increase the accuracy of selection in tree breeding (associated with higher gain). We investigated the combined pedigree ... -
Improving accuracy of breeding values by incorporating genomic information in spatial-competition mixed models [Conjunto de datos]
Cappa, Eduardo Pablo; El-Kassaby, Yousry A.; Muñoz, Facundo; Garcia, Martin Nahuel; Villalba, Pamela Victoria; Klapste, Jaroslav; Marcucci Poltri, Susana Noemi (2017-09)Supplementary information of a Eucalyptus grandis population, genomic and pedigree data including identity information of trees, family, and provenance of the paper entitled: Improving accuracy of breeding values by ... -
New validated eucalyptus SSR markers located in candidate genes involved in growth and plant development
Acuña, Cintia Vanesa; Rivas, Juan Gabriel; Aguirre, Natalia Cristina; Villalba, Pamela Victoria; Martinez, Maria Carolina; Garcia, Martin Nahuel; Hopp, Horacio Esteban; Marcucci Poltri, Susana Noemi (Instituto Nacional de Investigación y Tecnología Agraria y Alimentaria (España), 2020)Aim of study: To validate and characterize new microsatellites or Simple Sequence Repeats (SSR) markers, located within genomic transcribed sequences related to growth and plant developmental traits, in Eucalyptus ... -
Optimizing ddRADseq in non-model species: a case study in Eucalyptus dunnii maiden
Aguirre, Natalia Cristina; Filippi, Carla Valeria; Zaina, Giusi; Rivas, Juan Gabriel; Acuña, Cintia Vanesa; Villalba, Pamela Victoria; Garcia, Martin Nahuel; Gonzalez, Sergio; Rivarola, Maximo Lisandro; Martinez, Maria Carolina; Puebla, Andrea Fabiana; Morgante, Michele; Hopp, Horacio Esteban; Paniego, Norma Beatriz; Marcucci Poltri, Susana Noemi (MDPI, 2019-08)Restriction site-associated DNA sequencing (RADseq) and its derived protocols, such as double digest RADseq (ddRADseq), offer a flexible and highly cost-effective strategy for efficient plant genome sampling. This has ... -
Single - step genomic prediction of Eucalyptus dunnii using different identity by descent and identity by state relation ship matrices
Jurcic, Esteban Javier; Villalba, Pamela Victoria; Pathauer, Pablo Santiago; Palazzini, Dino; Oberschelp, Gustavo Pedro Javier; Harrand, Leonel; Garcia, Martin Nahuel; Aguirre, Natalia Cristina; Acuña, Cintia Vanesa; Martinez, Maria Carolina; Rivas, Juan Gabriel; Cisneros, Esteban F.; Lopez, Juan Adolfo; Marcucci Poltri, Susana Noemi; Munilla, Sebastian; Cappa, Eduardo Pablo (Nature, 2021-06-18)Eucalyptus L’Hér. (Myrtaceae) is the most valuable and globally planted forest tree genus. Fast growth, adaptability to a broad diversity of tropical and subtropical regions, combined with versatile wood properties for ... -
SSRs, SNPs and DArTs comparison on estimation of relatedness and genetic parameters’ precision from a small half-sib sample population of eucalyptus grandis
Cappa, Eduardo Pablo; Klapste, Jaroslav; Garcia, Martin Nahuel; Villalba, Pamela Victoria; Marcucci Poltri, Susana Noemi (2016)Simple sequence repeats (SSR) are the most widely used molecular markers for relatedness inference due to their multi-allelic nature and high informativeness. However, there is a growing trend toward using high-throughput ... -
Transferability of microsatellite markers located in candidate genes for wood properties between Eucalyptus species
Acuña, Cintia Vanesa; Villalba, Pamela Victoria; Hopp, Horacio Esteban; Marcucci Poltri, Susana Noemi (Instituto Nacional de Investigación y Tecnología Agraria y Alimentaria (España), 2014)AIM OF STUDY: To analyze the feasibility of extrapolating conclusions on wood quality genetic control between different Eucalyptus species, particularly from species with better genomic information, to those less characterized. ...