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Assessment of genetic diversity and population structure in a garlic (Allium sativum L.) germplasm collection varying in bulb content of pyruvate, phenolics, and solids
Barboza Rojas, Karina; Salinas Palmieri, Maria Cecilia; Acuña, Cintia Vanesa; Bannoud, Florencia; Beretta, Hebe Vanesa; Garcia Lampasona, Sandra Claudia; Burba, Jose Luis; Galmarini, Claudio Romulo; Cavagnaro, Pablo (Elsevier, 2019-10)This study characterized genetic diversity in the Argentine garlic germplasm bank by analysis of 10 SSR loci in 73 garlic accessions. A total of 43 alleles and polymorphic information content (PIC) value of 0.38, along ... -
Characterization of functional SSR markers in Prosopis alba and their transferability across Prosopis species
Pomponio, Maria Florencia; Acuña, Cintia Vanesa; Petreath, Vivien; Lopez Lauenstein, Diego; Marcucci Poltri, Susana Noemi; Torales, Susana Leonor (Instituto Nacional de Investigación y Tecnología Agraria y Alimentaria (España), 2015)Aim of study: The aim of the study was to characterize functional microsatellite markers in Prosopis alba and examine the transferability to species from the Prosopis genus. Area of the study: samples were obtained from ... -
Characterization of genetic diversity in accessions of prunus salicina lindl : keeping fruit flesh color ideotype while adapting to water stressed environments
Acuña, Cintia Vanesa; Rivas, Juan Gabriel; Brambilla, Silvina Maricel; Cerrillo, Teresa; Frusso, Enrique; Garcia, Martin Nahuel; Villalba, Pamela Victoria; Aguirre, Natalia Cristina; Sabio Y Garcia, Julia Veronica; Martinez, Maria Carolina; Hopp, Horacio Esteban; Marcucci Poltri, Susana Noemi (MDPI, 2019-08)The genetic diversity of 14 Japanese plum (Prunus salicina Lindl) landraces adapted to an ecosystem of alternating flooding and dry conditions was characterized using neutral simple sequence repeat (SSR) markers. Twelve ... -
Comparación de dos protocolos NIR de madera en selección fenómica de Eucalyptus grandis para el mejoramiento forestal
Garcia, Martin Nahuel; Batistelli, Marianela; Villalba, Pamela Victoria; Aguirre, Natalia Cristina; Rivas, Juan Gabriel; Acuña, Cintia Vanesa; Oberschelp, Gustavo Pedro Javier; Harrand, Leonel; Sergent, Anne Sophie Marie; Martinez, Maria Carolina; Martinez Meier, Alejandro; Marcucci Poltri, Susana Noemi (REDBIO, 2025-06)La Selección Fenómica (SF), basada en modelos estadísticos que utilizan datos de alta dimensionalidad como los espectros NIR (Near Infrared Reflectance), se ha consolidado como una herramienta prometedora para acelerar los ... -
Comparación entre selección genómica y selección fenómica en el mejoramiento de Eucalyptus grandis
Garcia, Martin Nahuel; Aguirre, Natalia Cristina; Villalba, Pamela Victoria; Rivas, Juan Gabriel; Martinez, Maria Carolina; Acuña, Cintia Vanesa; Morán, Mauricio; Arévalos, Carlos; Rodrigues, Jose; Carreras, Rocío; Cisneros, Esteban F.; Marcucci Poltri, Susana Noemi (INTA, 2024-11)Introducción: La Selección Genómica (SG) ha demostrado una superioridad consistente en la precisión sobre las metodologías basadas en selección asistida por marcadores y selección tradicional basada en información de ... -
Comparison of ddRADseq and EUChip60K SNP genotyping systems for population genetics and genomic selection in Eucalyptus dunnii (Maiden)
Aguirre, Natalia Cristina; Villalba, Pamela Victoria; Garcia, Martin Nahuel; Filippi, Carla Valeria; Rivas, Juan Gabriel; Martinez, Maria Carolina; Acuña, Cintia Vanesa; Lopez, Javier Augusto; Lopez, Juan Adolfo; Pathauer, Pablo Santiago; Palazzini, Dino; Harrand, Leonel; Oberschelp, Gustavo Pedro Javier; Marco, Martin Alberto; Cisneros, Esteban F.; Carreras, Rocío; Alves, Ana; Rodrigues, Jose; Hopp, Horacio Esteban; Grattapaglia, Dario; Cappa, Eduardo Pablo; Paniego, Norma Beatriz; Marcucci Poltri, Susana Noemi (Frontiers Media, 2024-03)Eucalyptus dunnii is one of the most important Eucalyptus species for short-fiber pulp production in regions where other species of the genus are affected by poor soil and climatic conditions. In this context, E. dunnii ... -
De novo assembly and characterization of leaf transcriptome for the development of functional molecular markers of the extremophile multipurpose tree species Prosopis alba
Torales, Susana Leonor; Rivarola, Maximo Lisandro; Pomponio, Maria Florencia; Gonzalez, Sergio Alberto; Acuña, Cintia Vanesa; Fernandez, Paula Del Carmen; Lopez Lauenstein, Diego; Verga, Anibal; Hopp, Horacio Esteban; Paniego, Norma Beatriz; Marcucci Poltri, Susana Noemi (2013-10)Background: Prosopis alba (Fabaceae) is an important native tree adapted to arid and semiarid regions of north-western Argentina which is of great value as multipurpose species. Despite its importance, the genomic resources ... -
De novo transcriptome sequencing and SSR markers development for Cedrela balansae C.DC., a native tree species of northwest Argentina
Torales, Susana Leonor; Rivarola, Maximo Lisandro; Gonzalez, Sergio Alberto; Inza, Maria Virginia; Pomponio, Maria Florencia; Fernandez, Paula Del Carmen; Acuña, Cintia Vanesa; Zelener, Noga; Fornes, Luis Fernando; Hopp, Horacio Esteban; Paniego, Norma Beatriz; Marcucci Poltri, Susana Noemi (Plos One, 2018-12)The endangered Cedrela balansae C.DC. (Meliaceae) is a high-value timber species with great potential for forest plantations that inhabits the tropical forests in Northwestern Argentina.Research on this species is scarce ... -
Desarrollo de marcadores funcionales y evaluación de la diversidad genética en Eucalyptus globulus con énfasis en genes potencialmente involucrados en características de calidad de la madera
Acuña, Cintia Vanesa (Facultad de Ciencias Exactas y Naturales, Universidad de Buenos Aires, 2011)Eucalyptus globulus es la especie forestal con mejor aptitud papelera y para la obtención de bioenergía a partir de celulosa, mayormente plantada en regiones templadas del mundo. Los proyectos genómicos en Eucalyptus han ... -
Desarrollo mediante ddRADseq y aplicación de nuevos marcadores SSR en pecán para identificación de cultivares
Rivas, Juan Gabriel; Aguirre, Natalia Cristina; Garcia, Martin Nahuel; Acuña, Cintia Vanesa; Villalba, Pamela Victoria; Grassi, Ana Laura; Frusso, Enrique Alberto; Ceballos, Dario Sebastian; Martinez, Maria Carolina; Marcucci Poltri, Susana Noemi (INIA, 2024-11)Introducción: El pecán (Carya illinoinensis) es una especie con una amplia distribución natural, adaptada a diversos ambientes y climas. Presenta una floración diclino monoica con dicogamia, es decir que las flores femeninas ... -
Estudio de diversidad y estructura genética de procedencias locales de Eucalyptus sideroxylon (A.Cunn.ex Woolls) del norte de la provincia de Buenos Aires (Argentina)
Rivas, Juan Gabriel; Pathauer, Pablo Santiago; Aguirre, Natalia Cristina; Villalba, Pamela Victoria; Garcia, Martin Nahuel; Palazzini, Dino; Cappa, Eduardo Pablo; Acuña, Cintia Vanesa; Hopp, Horacio Esteban; Martinez, Maria Carolina; Marcucci Poltri, Susana Noemi (Red Argentina de Ciencia y Tecnología Forestal, 2023-03)Introducción: Eucalyptus sideroxylon (A.Cunn. ex Woolls) posee una amplia distribución natural, tolera bien las heladas, sequias y suelos pobres, pudiendo crecer en ambientes con 400 mm de precipitación anual (Boland et ... -
Impacts of population structure and analytical models in genome-wide association studies of complex traits in forest trees: a case study in Eucalyptus globulus
Cappa, Eduardo Pablo; El Kassaby, Yousry A.; Garcia, Martin Nahuel; Acuña, Cintia Vanesa; Borralho, Nuno M.; Grattapaglia, Dario; Marcucci Poltri, Susana Noemi (Plos One, 2013-11-25)The promise of association genetics to identify genes or genomic regions controlling complex traits has generated a flurry of interest. Such phenotype-genotype associations could be useful to accelerate tree breeding cycles, ... -
New validated eucalyptus SSR markers located in candidate genes involved in growth and plant development
Acuña, Cintia Vanesa; Rivas, Juan Gabriel; Aguirre, Natalia Cristina; Villalba, Pamela Victoria; Martinez, Maria Carolina; Garcia, Martin Nahuel; Hopp, Horacio Esteban; Marcucci Poltri, Susana Noemi (Instituto Nacional de Investigación y Tecnología Agraria y Alimentaria (España), 2020)Aim of study: To validate and characterize new microsatellites or Simple Sequence Repeats (SSR) markers, located within genomic transcribed sequences related to growth and plant developmental traits, in Eucalyptus ... -
Optimizing ddRADseq in non-model species: a case study in Eucalyptus dunnii maiden
Aguirre, Natalia Cristina; Filippi, Carla Valeria; Zaina, Giusi; Rivas, Juan Gabriel; Acuña, Cintia Vanesa; Villalba, Pamela Victoria; Garcia, Martin Nahuel; Gonzalez, Sergio; Rivarola, Maximo Lisandro; Martinez, Maria Carolina; Puebla, Andrea Fabiana; Morgante, Michele; Hopp, Horacio Esteban; Paniego, Norma Beatriz; Marcucci Poltri, Susana Noemi (MDPI, 2019-08)Restriction site-associated DNA sequencing (RADseq) and its derived protocols, such as double digest RADseq (ddRADseq), offer a flexible and highly cost-effective strategy for efficient plant genome sampling. This has ... -
Phenotypic and genetic characterization of Africanized Apis mellifera colonies with natural tolerance to Varroa destructor and contrasting defensive behavior
Bianchi, Eliana Mariel; Ferrari, Carolina; Aguirre, Natalia Cristina; Filippi, Carla Valeria; Vera, Pablo Alfredo; Puebla, Andrea Fabiana; Gennari, Gerardo Pablo; Rodriguez, Graciela Adriana; Scannapieco, Alejandra Carla; Acuña, Cintia Vanesa; Lanzavecchia, Silvia Beatriz (Frontiers Media, 2023-08-31)Africanized Apis mellifera colonies with promising characteristics for beekeeping have been detected in northern Argentina (subtropical climate) and are considered of interest for breeding programs. Integral evaluation of ... -
Selección asistida por marcadores para características de interés forestal en un cruzamiento de Eucalyptus grandis
Garcia, Martin Nahuel; Aguirre, Natalia Cristina; Villalba, Pamela Victoria; Rivas, Juan Gabriel; Martinez, Maria Carolina; Acuña, Cintia Vanesa; Oberschelp, Gustavo Pedro Javier; Harrand, Leonel; Lopez, Juan Adolfo; Genes, Pabla Yolanda; Vera Bravo, Carlos David; Marcucci Poltri, Susana Noemi (INTA, 2024-11)El programa de mejoramiento de E. grandis del INTA cuenta con 10 clones inscriptos en el INASE, de los cuales, los clones EG-INTA157 (G) y EG-INTA36 (36) son los más plantados en Argentina. En 2008 se instalaron cuatro ... -
Single - step genomic prediction of Eucalyptus dunnii using different identity by descent and identity by state relation ship matrices
Jurcic, Esteban Javier; Villalba, Pamela Victoria; Pathauer, Pablo Santiago; Palazzini, Dino; Oberschelp, Gustavo Pedro Javier; Harrand, Leonel; Garcia, Martin Nahuel; Aguirre, Natalia Cristina; Acuña, Cintia Vanesa; Martinez, Maria Carolina; Rivas, Juan Gabriel; Cisneros, Esteban F.; Lopez, Juan Adolfo; Marcucci Poltri, Susana Noemi; Munilla, Sebastian; Cappa, Eduardo Pablo (Nature, 2021-06-18)Eucalyptus L’Hér. (Myrtaceae) is the most valuable and globally planted forest tree genus. Fast growth, adaptability to a broad diversity of tropical and subtropical regions, combined with versatile wood properties for ... -
Transcriptome dynamics of rooting zone and leaves during in vitro adventitious root formation in eucalyptus nitens
Ayala, Paula Gabriela; Acevedo, Raúl Maximiliano; Luna, Claudia Verónica; Rivarola, Maximo Lisandro; Acuña, Cintia Vanesa; Marcucci Poltri, Susana Noemi; González, Ana M.; Sansberro, Pedro Alfonso (MDPI, 2022-11)Wood properties and agronomic traits associated with fast growth and frost tolerance make Eucalyptus nitens a valuable forest alternative. However, the rapid age-related decline in the adventitious root (AR) formation ... -
Transcriptome survey of Patagonian southern beech Nothofagus nervosa (= N. Alpina): assembly, annotation and molecular marker discovery
Torales, Susana Leonor; Rivarola, Maximo Lisandro; Pomponio, Maria Florencia; Fernandez, Paula Del Carmen; Acuña, Cintia Vanesa; Marchelli, Paula; Gonzalez, Sergio; Azpilicueta, Maria Marta; Hopp, Horacio Esteban; Gallo, Leonardo Ariel; Paniego, Norma Beatriz; Marcucci Poltri, Susana Noemi (Genomics 13: 291 (2012), 2012-07-02)Nothofagus nervosa is one of the most emblematic native tree species of Patagonian temperate forests. Here, the shotgun RNA-sequencing (RNA-Seq) of the transcriptome of N. nervosa, including de novo assembly, functional ... -
Transferability of microsatellite markers located in candidate genes for wood properties between Eucalyptus species
Acuña, Cintia Vanesa; Villalba, Pamela Victoria; Hopp, Horacio Esteban; Marcucci Poltri, Susana Noemi (Instituto Nacional de Investigación y Tecnología Agraria y Alimentaria (España), 2014)AIM OF STUDY: To analyze the feasibility of extrapolating conclusions on wood quality genetic control between different Eucalyptus species, particularly from species with better genomic information, to those less characterized. ...