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Assessing small RNA profles in potato diploid hybrid and its resynthesized allopolyploid reveals conserved abundance with distinct genomic distribution
Zavallo, Diego; Cara, Nicolás; Leone, Melisa; Crescente, Juan Manuel; Marfil, Carlos Federico; Masuelli, Ricardo Williams; Asurmendi, Sebastian (Springer, 2024-04)Allopolyploidy, a complex process involving interspecific hybridization and whole genome duplication, significantly impacts plant evolution, leading to the emergence of novel phenotypes. Polyploids often present phenotypic ... -
Cannabis sativa L. Miniature Inverted-Repeat Transposable- Element Landscapes in Wild-Type (JL) and Domesticated Genome (CBDRx)
Quiroga, Mariana Paola; Crociara, Clara Sonia; Schenfeld, Esteban Martín; Fernandez, Franco Daniel; Crescente, Juan Manuel; Vanzetti, Leonardo Sebastian; Helguera, Marcelo (MDPI, 2025-03-25)Cannabis sativa L. is a globally cultivated plant with significant industrial, nutritional, and medicinal value. Its genome, comprising nine autosomes and sex chromosomes (X and Y), has been extensively studied, particularly ... -
Genomic re-assessment of the transposable element landscape of the potato genome
Zavallo, Diego; Crescente, Juan Manuel; Gantuz, Magdalena; Leone, Melisa; Vanzetti, Leonardo Sebastian; Masuelli, Ricardo Williams; Asurmendi, Sebastian (Springer, 2020-05)Transposable elements (TEs) are DNA sequences with the ability to autoreplicate and move throughout the host genome. TEs are major drivers in stress response and genome evolution. Given their significance, the development ... -
MITE Tracker : an accurate approach to identify miniature inverted-repeat transposable elements in large genomes
Crescente, Juan Manuel; Zavallo, Diego; Helguera, Marcelo; Vanzetti, Leonardo Sebastian (BioMed Central, 2018)Background: Miniature inverted-repeat transposable elements (MITEs) are short, non-autonomous class II transposable elements present in a high number of conserved copies in eukaryote genomes. An accurate identification ... -
Phenobook : an open source software for phenotypic data collection
Crescente, Juan Manuel; Guidobaldi, Fabio; Demichelis, Melina; Formica, Maria Beatriz; Helguera, Marcelo; Vanzetti, Leonardo Sebastian (2017-04)Background: Research projects often involve observation, registration, and data processing starting from information obtained in field experiments. In many cases, these tasks are carried out by several persons in different ...